species:   Scscl
pid:       PID1740
parent:    Ssc-milR-216
paralog:   
locus:     NW_001820835.1:639564-639659
matures:   ['UCAUGUGGAAGUGCUCUAGGCU', 'ACUUGGGGUAAUGACAAUGAUG']
srr:       SRR12527895
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram NW_001820835.1:639564-639659

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

                   *****************                     *********************                  
GCCGUCUAGAUCAUGUGGAAGUGCUCUAGGCUCUCGAGGUGGUUUAUAACUAGGCGUCAAGCAGGGACUUGGGGUAAUGACAAUGAUGUAAUUUAU
......((.(((((.((..(.((((((((((((((((.((((((...))))..)).))..).)))).))))))))).)..))))))).))......
----------UCAUGUGGAAGUGCUCUAGGCU---------------------------------------------------------------- l=22 a=0 c
------------------------------------------------------------------ACUUGGGGUAAUGACAAUGAUG-------- l=22 a=0 c*
-----------------------------------------------------------AGCAGGGACUUGGGGUAAU------------------ l=19 a=1 ma
---------------------UGCUCUAGGCUCUCG------------------------------------------------------------ l=15 a=0 ma*

-----------------------------------------------------------AGCAGGGACUUGGGGUAAU------------------ l=19 a=1 (ma)

mb-01011
ax-1011101
ku-01
ss-100011111010
fn-011
